Hero section

NBTs: How CRISPR/Cas Could Revolutionize Apple Breeding

Foto credits: © Michael Pezzei & Patrick Schwienbacher

ipoma Issue 03 presents

Genetic evolution

Are New Breeding Techniques (NBTs) the key to solving agriculture’s toughest challenges, from disease resistance to climate change?

  • Evolution through trial and error has always been nature’s way of adapting to challenges. But agriculture needs faster solutions to stay ahead of diseases, pests, and the climate crisis.
  • Enter New Breeding Techniques (NBTs), particularly CRISPR/Cas, which scientists believe could transform apple breeding by enabling precise, efficient genome editing without introducing foreign genes.
  • Yet, the debate around regulation and consumer acceptance continues. 
  • This article dives into how NBTs work, their potential, and the controversies surrounding them in Europe.
  • Do you have further questions? Contact us now!


*from ipoma Issue 03, “Genetic Evolution”, Ex Libris 2024

https://www.fierabolzano.it/uploads/blocks/images/ipo_ipoma_e_fieramesse_titelbild_ipoma_icon_2000x1500px_9uva_vzjo_m.jpg

Prefer Listening?


For those who’d rather listen, this article is also available as an audio version. You may tune in on Spotify and explore how CRISPR/Cas is revolutionizing apple breeding on the go.

Dr. Thomas Letschka

Dr. Thomas Letschka

Head of the Breeding Genomics working group at the Laimburg Research Centre

NBTs bring about changes that happen in nature - only faster and targeted better. 

Dr. Thomas Letschka

Head of the Breeding Genomics working group at the Laimburg Research Centre
Dr. Giovanni Broggini

Dr. Giovanni Broggini

Researcher in molecular plant breeding at ETH Zürich

We are attempting to turn off genes that make apples susceptible to disease. 

Dr. Giovanni Broggini

Researcher in molecular plant breeding at ETH Zürich

What are New Breeding Techniques (NBTs)?

A faster, more precise approach to apple breeding 

   

  • Traditional apple breeding is slow, requiring decades to develop varieties that balance disease resistance, flavor, and texture. New Breeding Techniques (NBTs), such as CRISPR/Cas, offer a solution by allowing scientists to edit the apple genome with precision.
  • Unlike conventional genetic engineering, which introduces foreign genes, NBTs modify genes already present in the apple — essentially mimicking natural mutations, but much faster.
  • “NBTs aim to quickly bring about precise changes in the genome that would take decades to achieve naturally”, explains Dr. Thomas Letschka of the Laimburg Research Centre.
Video Thumbnail
https://www.fierabolzano.it/uploads/blocks/images/genetics_7cr9_gdv0_m.png

How CRISPR/Cas works

Genetic scissors revolutionizing agriculture


  • CRISPR/Cas, the best-known NBT, is an enzyme system produced by bacteria and often referred to as 'genetic scissors' for its ability to make precise cuts in DNA. 
  • This technology can deactivate genes that make apples susceptible to diseases or introduce resistance genes from wild apple species. The process is highly targeted, reducing the unintended changes associated with conventional genetic engineering.
  • “We can control this very precisely, which is a key difference from conventional genetic engineering.” (cit. ipoma, 2024)


https://www.fierabolzano.it/uploads/blocks/images/genetics_4_dmsv_cai7_m.png

Benefits of CRISPR/Cas in Apple Breeding


  • Faster Breeding Cycles: Reduces breeding time from decades to a few years. 
  • Environmental Benefits: More resistant apples mean less reliance on chemical pesticides. 
  • Consumer-Focused Traits: Improves flavor and texture while enhancing resilience. 

  

An example: in Zurich, Dr. Giovanni  Broggini is testing CRISPR/Cas to improve Gala apples’ resistance to fire blight by deactivating specific susceptibility genes.

Glossary

TermDefinition
Cisgenesis If a plant is cisgenically modified, only genes from plants of the same species are inserted, either using conventional genetic engineering methods or NBTs. They must come from a biologically compatible species, e.g., from a wild apple whose gene is transferred into a variety of the domestic apple. If an apple receives a gene from a tomato, it is no longer a cisgenic plant. 
CRISPR/Cas An enzyme produced by bacteria that can make cuts at specific points in DNA, also known as “genetic scissors.” It can be used either to switch off individual genes such as a susceptibility gene that makes plants more susceptible to certain diseases, or to insert specific genes such as a gene from a related apple variety to make the apple more resistant to certain fungi without changing it significantly in any other way.
Genome Editing Generic term for all technological methods used to edit the genome without adding foreign genes. These include NBTs such as CRISPR/Cas.
New Breeding Techniques (NBTs) New methods of genetic engineering. The best known is CRISPR/Cas, which involves intervening in specific parts of DNA in exactly the same way as spontaneous mutations that occur in nature. This distinguishes NBTs from conventional genetic engineering methods (transgenesis). The EU is therefore currently leaning towards not equating NBTs with conventional GMO methods.
Precautionary principle This principle sets the direction for legislation on genetic engineering in Europe. It not only looks at the end product but also at the processes that led to the creation of the product. 
Principle of substantial equivalence Unlike the precautionary principle, this principle primarily focuses on the end product, the processes that led to its creation being inconsequential. This principle assumes that a newly developed food is just as safe as an existing one if it has the same composition. The principle is widely applied in places such as North and South America.
Transgenesis Conventional genetic engineering method. Foreign genes are transferred from one organism to another, e.g., to a plant. Today, the term is often used as a synonym for all conventional genetic engineering methods. Transgenically modified plant species authorized for cultivation so far include soy, maize, cotton, and rapeseed. This method is often rejected by consumers, especially in Europe, where transgenic plants – genetically modified organisms, or GMOs for short – must be labeled as such.
https://www.fierabolzano.it/uploads/blocks/images/genetics_2_ejgu_jcdz_m.png

The Regulatory Debate in Europe

NBTs and GMO Legislation: Where does CRISPR/Cas stand?


  • No-one in Europe has yet applied for authorization for an apple that has been improved using CRISPR/Cas. 
  • In the EU, NBTs like CRISPR/Cas are currently regulated under the same strict laws as GMOs, making approvals costly and complex. 
  • However, the European Commission is considering classifying NBTs as equivalent to conventional breeding, which would lower barriers and encourage adoption.
  • “If this legislation is implemented, it could be a breakthrough for NBTs in Europe”, Letschka remarks.
https://www.fierabolzano.it/uploads/blocks/images/facts_jpg_weud_jn6a_o.jpg

Challenges and Criticisms

Consumer acceptance and risk assessment

 

  • Critics argue that the EU’s current proposals lack comprehensive risk assessments for NBT crops. Labeling debates also continue, with some claiming that mandatory labeling would increase costs and deter consumers. Others see transparency as essential to gaining public trust.
  • “A comprehensive risk assessment must precede authorization; skipping this step is irresponsible”, warns Jan Plagge, president of Bioland.
  • While Europe deliberates, other countries are moving ahead. In the U.S., CRISPR-edited apples that don’t brown are already on the market under the Arctic® brand. Japan has introduced CRISPR-edited tomatoes with health benefits. 
  • These examples show how the technology could reshape agriculture worldwide, with Europe at a crossroads.

Looking ahead

Will NBTs revolutionize apple breeding in Europe?


  • The future of apple breeding lies in faster, more precise methods like CRISPR/Cas. By enhancing disease resistance and reducing pesticide dependence, these innovations could help address climate and agricultural challenges.
  • But their success depends on consumer trust and regulatory support. As Europe debates their classification, one thing is clear: the potential of NBTs to transform apple breeding is immense.
https://www.fierabolzano.it/uploads/blocks/images/umschlag_ipoma_03_de_ausschnitt_f7dc_mj8y_m.jpg
  • Do you like this content? Are you an apple expert or enthusiast? If you're specifically interested in this topic, you can download "Genetic Evolution"
  • If you'd like to read the full ipoma Issue 03, you can download it here for free. 
  • Here you can find top articles, as well as the complete issues of ipoma Issue 02 and ipoma Issue 01

  

Enjoy reading!

Download 'Genetic Evolution'

pdf (1.47 MB)
Download

Download the entire ipoma Issue 03

pdf (26.9 MB)
Download

Stay up-to-date with our newsletter!

With our free newsletter, you won't miss any of our events.

Subscribe now